| 1. Set the method to use for prediction:: BLAST is used by default. MEGABLAST is presumably a bit faster. |
| BLAST MEGABLAST |
| 2. Set Up filter options: |
| Coverage (%): Identity (%):
Word Size: E-Value: |
| 3. Set the number of segments to compare: Sequences of each genome must be in a separate fast formatted file, or you can cut and paste sequences of one genome at a time. The Sample Data page shows examples of genome sequence files. Incomplete genome sequences where one or more segment sequences are missing are allowed. |
